Gene: Cc03_g01900
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc03_g01900
- Transcript Identifier Cc03_g01900.1
- Gene Type Coding gene
- Location chr3 : 1404057-1413987 : positive
Gene Family Information
- ID HOM05D001780
- #Genes/#Species 367/100
- Phylogenetic origin
- ID ORTHO05D005322
- #Genes/#Species 160/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- UniProtKB I1MRI5
- UniProtKB Q8YXY3
- UniProtKB B7K5H5
- UniProtKB Q8DGI7
- UniProtKB B9RT52
- UniProtKB F6HDF8
- id GSCOCG00025819001
Descriptions
- Description Isoleucine--tRNA ligase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006428 | IEA | InterPro | isoleucyl-tRNA aminoacylation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT5G49030 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004822 | IEA | InterPro | isoleucine-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0000049 | IEA | InterPro | tRNA binding | |
| GO:0002161 | IEA | InterPro | aminoacyl-tRNA editing activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G49030 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G49030 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002301 | Isoleucine-tRNA ligase |
| IPR009080 | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding |
| IPR033708 | Isoleucyl tRNA synthetase type 1, anticodon-binding domain |
| IPR013155 | Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding |
| IPR009008 | Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR010663 | Zinc finger, FPG/IleRS-type |
| IPR002300 | Aminoacyl-tRNA synthetase, class Ia |
| Mapman id | Description |
|---|---|
| 17.2.11 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase |