Gene: Cc02_g24740
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc02_g24740
- Transcript Identifier Cc02_g24740.1
- Gene Type Coding gene
- Location chr2 : 21897762-21907016 : negative
Gene Family Information
- ID HOM05D005846
- #Genes/#Species 134/94
- Phylogenetic origin
- ID ORTHO05D007369
- #Genes/#Species 131/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB B9RD41
- UniProtKB Q8L7F7
- UniProtKB Q63850
- UniProtKB P37198
- UniProtKB P17955
- UniProtKB D7LBU6
- id GSCOCG00028847001
Descriptions
- Description Putative Nucleoporin, Nsp1-like, C-terminal
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010930 | ISO | PLAZA Integrative Orthology | negative regulation of auxin mediated signaling pathway | AT2G45000 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017056 | IEA | InterPro | structural constituent of nuclear pore | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G45000 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005643 | IEA | InterPro | nuclear pore | |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT2G45000 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G45000 |
| GO:0034399 | ISO | PLAZA Integrative Orthology | nuclear periphery | AT2G45000 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 23.5.1.1.6.2 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP62) |