Gene: Cc02_g17070
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc02_g17070
- Transcript Identifier Cc02_g17070.1
- Gene Type Coding gene
- Location chr2 : 15705697-15706486 : negative
Gene Family Information
- ID HOM05D000578
- #Genes/#Species 962/99
- Phylogenetic origin
- ID ORTHO05D000422
- #Genes/#Species 952/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB B9GRG8
- UniProtKB B9R832
- UniProtKB D9ZIW4
- UniProtKB Q9LQZ7
- UniProtKB Q96288
- UniProtKB Q9SYM2
- id GSCOCG00014212001
Descriptions
- Description Probable salt tolerance-like protein At1g75540
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:2000306 | ISO | PLAZA Integrative Orthology | positive regulation of photomorphogenesis | AT4G39070 |
| GO:1905157 | ISO | PLAZA Integrative Orthology | positive regulation of photosynthesis | AT1G75540 |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT4G39070 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT1G75540 |
| GO:0009741 | ISO | PLAZA Integrative Orthology | response to brassinosteroid | AT4G39070 |
| GO:0009641 | ISO | PLAZA Integrative Orthology | shade avoidance | AT1G75540 |
| GO:0010117 | ISO | PLAZA Integrative Orthology | photoprotection | AT1G75540 |
| GO:1900458 | ISO | PLAZA Integrative Orthology | negative regulation of brassinosteroid mediated signaling pathway | AT4G39070 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT4G39070 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G75540 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G75540 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000315 | B-box-type zinc finger |
| Mapman id | Description |
|---|---|
| 15.5.1.1 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-DBB) |