Gene: Cc00_g00830

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc00_g00830
  • Transcript Identifier Cc00_g00830.1
  • Gene Type Coding gene
  • Location chr0 : 2001507-2005162 : negative

Gene Family Information

  • ID HOM05D002459
  • #Genes/#Species 276/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB B9RW93
  • UniProtKB F6HGJ1
  • UniProtKB A5YVF1
  • UniProtKB A1Y2B7
  • UniProtKB A5ANH9
  • UniProtKB Q9LDX1
  • id GSCOCG00041127001

Descriptions

  • Description Protein SUPPRESSOR OF GENE SILENCING 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031047
IEA
InterProgene silencing by RNA
GO:0051607
IEA
InterProdefense response to virus
GO:0009616
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immune response AT5G23570
GO:0010050
ISO
PLAZA Integrative Orthologyvegetative phase change AT5G23570
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT5G23570
GO:0010025
ISO
PLAZA Integrative Orthologywax biosynthetic process AT5G23570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G23570
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G23570
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT5G23570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038588 XS domain superfamily
IPR044287 Protein SUPPRESSOR OF GENE SILENCING 3
IPR005380 XS domain
IPR005381 Zinc finger-XS domain
Mapman id Description
12.5.1.3 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.stabilization factor (SGS3)