Gene: Carub.0008s2113

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0008s2113
Transcript Identifier Carub.0008s2113.1
Gene Type Coding gene
Location scaffold_8 : 10557882-10559218 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000203
#Genes/#Species 1948/93
Phylogenetic origin

ID ORTHO05D000135
#Genes/#Species 1747/91
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

id Carub.0008s2113.v1.1
pacid 39251873
synonym Carubv10028580m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR11945//PTHR11945:SF185 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL62

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0045944	IEA	InterPro	positive regulation of transcription by RNA polymerase II
GO:2000012	ISO	PLAZA Integrative Orthology	regulation of auxin polar transport	AT5G60440
GO:0009960	ISO	PLAZA Integrative Orthology	endosperm development	AT5G60440

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	InterPro	DNA binding
GO:0046983	IEA	InterPro	protein dimerization activity
GO:0000977	IEA	InterPro	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G60440

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002100	Transcription factor, MADS-box
IPR036879	Transcription factor, MADS-box superfamily
IPR033896	MADS MEF2-like

Mapman id	Description
15.5.14	RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)