Gene: Carub.0008s2058
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s2058
- Transcript Identifier Carub.0008s2058.1
- Gene Type Coding gene
- Location scaffold_8 : 10359169-10359716 : positive
Gene Family Information
- ID HOM05D000221
- #Genes/#Species 1858/100
- Phylogenetic origin
- ID ORTHO05D000245
- #Genes/#Species 1286/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0008s2058.v1.1
- pacid 39252291
- synonym Carubv10027312m.g
Descriptions
- Description K11251 - histone H2A (H2A)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070828 | ISO | PLAZA Integrative Orthology | heterochromatin organization | AT5G59870 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046982 | IEA | InterPro | protein heterodimerization activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003682 | ISO | PLAZA Integrative Orthology | chromatin binding | AT5G59870 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000786 | IEA | InterPro | nucleosome | |
| GO:0000792 | ISO | PLAZA Integrative Orthology | heterochromatin | AT5G59870 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G59870 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G59870 |
| GO:0005721 | ISO | PLAZA Integrative Orthology | pericentric heterochromatin | AT5G59870 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.1.1.1 | Chromatin organisation.chromatin structure.DNA wrapping.histone (H2A) |