Gene: Carub.0008s1791

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s1791
  • Transcript Identifier Carub.0008s1791.1
  • Gene Type Coding gene
  • Location scaffold_8 : 9416987-9419995 : negative

Gene Family Information

  • ID HOM05D000138
  • #Genes/#Species 2624/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s1791.v1.1
  • pacid 39252908
  • synonym Carubv10026181m.g

Descriptions

  • Description PTHR32467:SF23 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL5
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G57390
GO:0060771
ISO
PLAZA Integrative Orthologyphyllotactic patterning AT5G57390
GO:0060772
ISO
PLAZA Integrative Orthologyleaf phyllotactic patterning AT5G57390
GO:0009791
ISO
PLAZA Integrative Orthologypost-embryonic development AT5G57390
GO:0060774
ISO
PLAZA Integrative Orthologyauxin mediated signaling pathway involved in phyllotactic patterning AT5G57390
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT5G57390
GO:0040019
ISO
PLAZA Integrative Orthologypositive regulation of embryonic development AT5G57390
GO:1905392
ISO
PLAZA Integrative Orthologyplant organ morphogenesis AT5G57390
GO:1990110
ISO
PLAZA Integrative Orthologycallus formation AT5G57390
GO:0010311
ISO
PLAZA Integrative Orthologylateral root formation AT5G57390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G57390

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G57390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR016177 DNA-binding domain superfamily
IPR036955 AP2/ERF domain superfamily
Mapman id Description
15.5.7.3 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2)