Gene: AT5G57390

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G57390
  • Transcript Identifier AT5G57390.1
  • Gene Type Coding gene
  • Location Chr5 : 23253459-23256437 : negative

Gene Family Information

  • ID HOM05D000138
  • #Genes/#Species 2624/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G57390.1
  • symbol AIL5
  • Alias CHO1,CHOTTO 1,EMK,EMBRYOMAKER,PLT5,PLETHORA 5
  • uniprot Q6PQQ3

Descriptions

  • Description AINTEGUMENTA-like 5
  • Computational description AINTEGUMENTA-like 5 (AIL5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 9099 Blast hits to 5771 proteins in 325 species: Archae - 0; Bacteria - 38; Metazoa - 238; Fungi - 101; Plants - 7378; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990110
IGI
Gene Ontologycallus formation1
GO:0006355
TAS, IEA
Gene Ontologyregulation of transcription, DNA-templated2
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:1905392
IMP
Gene Ontologyplant organ morphogenesis3
GO:0010311
IGI
Gene Ontologylateral root formation4
GO:0060774
IGI
Gene Ontologyauxin mediated signaling pathway involved in phyllotactic patterning5
GO:0060772
IGI
Gene Ontologyleaf phyllotactic patterning5
GO:0060771
IGI
Gene Ontologyphyllotactic patterning6
GO:0048364
IMP
Gene Ontologyroot development7
GO:0040019
IMP
Gene Ontologypositive regulation of embryonic development7
GO:0009845
IMP
Gene Ontologyseed germination8
GO:0009791
IMP
Gene Ontologypost-embryonic development8

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
TAS
Gene OntologyDNA binding9
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
TAS
Gene OntologyDNA-binding transcription factor activity10 11
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding12

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
IC
Gene Ontologynucleus7 10

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.3 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2)