Gene: Carub.0008s1525
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s1525
- Transcript Identifier Carub.0008s1525.1
- Gene Type Coding gene
- Location scaffold_8 : 8421919-8423742 : negative
Gene Family Information
- ID HOM05D001155
- #Genes/#Species 535/97
- Phylogenetic origin
- ID ORTHO05D001080
- #Genes/#Species 497/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0008s1525.v1.1
- pacid 39252126
- synonym Carubv10027657m.g
Descriptions
- Description PTHR18968:SF137 - PYRUVATE DECARBOXYLASE 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001666 | ISO | PLAZA Integrative Orthology | response to hypoxia | AT5G54960 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030976 | IEA | InterPro | thiamine pyrophosphate binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016831 | IEA | InterPro | carboxy-lyase activity | |
| GO:0000287 | IEA | InterPro | magnesium ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G54960 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012001 | Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain |
| IPR029035 | DHS-like NAD/FAD-binding domain superfamily |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR011766 | Thiamine pyrophosphate enzyme, C-terminal TPP-binding |
| IPR012110 | Thiamine pyrophosphate (TPP)-dependent enzyme |
| IPR012000 | Thiamine pyrophosphate enzyme, central domain |
| Mapman id | Description |
|---|---|
| 3.11.1.1 | Carbohydrate metabolism.fermentation.acetic acid biosynthesis.pyruvate decarboxylase (PDC) |