Gene: Carub.0008s0987
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s0987
- Transcript Identifier Carub.0008s0987.1
- Gene Type Coding gene
- Location scaffold_8 : 6246086-6249731 : positive
Gene Family Information
- ID HOM05D004653
- #Genes/#Species 156/98
- Phylogenetic origin
- ID ORTHO05D006221
- #Genes/#Species 146/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0008s0987.v1.1
- pacid 39252095
- synonym Carubv10026308m.g
Descriptions
- Description 1.4.3.5//5.1.99.6 - Pyridoxal 5'-phosphate synthase / Pyridoxine (pyridoxamine)phosphate oxidase // NAD(P)H-hydrate epimerase / NAD(P)HX epimerase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008615 | IEA | InterPro | pyridoxine biosynthetic process | |
| GO:0006734 | ISO | PLAZA Integrative Orthology | NADH metabolic process | AT5G49970 |
| GO:0042817 | ISO | PLAZA Integrative Orthology | pyridoxal metabolic process | AT5G49970 |
| GO:0006739 | ISO | PLAZA Integrative Orthology | NADP metabolic process | AT5G49970 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004733 | IEA | InterPro | pyridoxamine-phosphate oxidase activity | |
| GO:0010181 | IEA | InterPro | FMN binding | |
| GO:0052856 | IEA | InterPro | NADHX epimerase activity | |
| GO:0052857 | IEA | InterPro | NADPHX epimerase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G49970 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G49970 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G49970 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036652 | YjeF N-terminal domain superfamily |
| IPR019576 | Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal |
| IPR011576 | Pyridoxamine 5'-phosphate oxidase, putative |
| IPR032976 | YjeF N-terminal domain-containing protein NAXE-like |
| IPR012349 | FMN-binding split barrel |
| IPR000659 | Pyridoxamine 5'-phosphate oxidase |
| IPR004443 | YjeF N-terminal domain |
| IPR021198 | Pyridoxamine 5'-phosphate oxidase, plant |
| Mapman id | Description |
|---|---|
| 50.1.4 | Enzyme classification.EC_1 oxidoreductases.EC_1.4 oxidoreductase acting on CH-NH2 group of donor |