Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 0.0e+00 1102.8 538 100.0
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 6.9e-293 1010.0 539 92.2
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 2.1e-289 998.4 540 91.5
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 2.6e-276 954.9 531 89.3
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 1.8e-272 942.2 545 85.3
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 5.7e-271 937.2 538 86.2
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 6.5e-259 897.1 539 84.2
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 1.4e-258 896.0 540 84.3
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 2.7e-257 891.7 539 83.9
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 6.1e-257 890.6 539 83.9
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 8.0e-257 890.2 553 80.1
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 8.0e-257 890.2 542 83.0
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 1.4e-256 889.4 539 83.7
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 7.2e-250 867.1 520 80.6
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 8.6e-227 790.4 548 69.7
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 2.8e-225 785.4 548 69.3
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 3.6e-225 785.0 518 72.2
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 4.7e-225 784.6 546 71.2
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 6.1e-225 784.3 484 76.2
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 2.0e-223 779.2 554 69.3
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 2.0e-223 779.2 491 74.1
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 9.8e-223 776.9 460 77.6
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 1.3e-222 776.5 459 78.4
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 3.7e-222 775.0 539 69.8
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 4.9e-222 774.6 518 71.0
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 8.3e-222 773.9 551 69.5
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 8.3e-222 773.9 565 67.1
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.1e-221 773.5 513 71.7
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 1.4e-221 773.1 537 69.3
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 3.2e-221 771.9 542 69.7
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 4.1e-221 771.5 549 69.9
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 7.0e-221 770.8 548 69.0
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 7.0e-221 770.8 523 71.1
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 9.2e-221 770.4 523 70.6
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 2.0e-220 769.2 541 68.8
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 3.5e-220 768.5 546 68.7
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 4.6e-220 768.1 467 76.0
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 3.0e-219 765.4 545 68.6
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 5.0e-219 764.6 490 74.5
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 6.6e-219 764.2 519 69.6
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 1.5e-218 763.1 459 76.9
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 1.9e-218 762.7 459 76.7
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 1.2e-217 760.0 459 76.5
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.2e-217 760.0 459 76.9
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 3.6e-217 758.4 538 69.1
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 4.7e-217 758.1 453 77.9
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 4.7e-217 758.1 481 73.2
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 4.7e-217 758.1 507 71.6
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 1.1e-216 756.9 463 74.7
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 2.3e-216 755.7 537 68.7
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 2.3e-216 755.7 537 69.6
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 2.3e-216 755.7 491 72.3
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 3.1e-216 755.4 459 76.0
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 6.8e-216 754.2 540 68.1
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 8.9e-216 753.8 491 71.3
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 1.5e-215 753.1 464 75.4
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 4.4e-215 751.5 484 72.7
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 5.8e-215 751.1 507 69.8
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 9.8e-215 750.4 491 70.7
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 1.3e-214 750.0 459 74.9
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 2.2e-214 749.2 544 67.1
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 2.2e-214 749.2 538 68.0
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 4.9e-214 748.0 491 70.7
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 1.4e-213 746.5 459 75.2
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 2.4e-213 745.7 613 62.6
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 4.1e-213 745.0 542 67.3
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.1e-213 745.0 512 69.1
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 5.4e-213 744.6 550 66.0
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 1.2e-212 743.4 539 67.0
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 2.7e-212 742.3 490 71.4
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 7.8e-212 740.7 459 75.2
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 5.1e-211 738.0 459 74.3
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 5.1e-211 738.0 460 74.1
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 6.6e-211 737.6 464 73.3
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 6.6e-211 737.6 608 61.2
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 6.6e-211 737.6 543 67.8
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 1.5e-210 736.5 532 66.4
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 7.3e-210 734.2 459 72.8
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.6e-209 733.0 459 75.4
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.8e-209 732.3 519 68.8
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 6.2e-209 731.1 464 73.3
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 6.2e-209 731.1 459 73.4
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.4e-208 729.9 469 72.5
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 1.8e-208 729.6 459 75.2
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 3.1e-208 728.8 459 75.2
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 8.9e-208 727.2 541 66.7
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 8.3e-206 720.7 529 66.2
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.1e-205 720.3 548 65.1
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 1.4e-205 719.9 510 69.6
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 2.4e-205 719.2 466 72.1
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 8.1e-201 704.1 490 67.6
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 1.4e-197 693.3 484 68.0
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 3.2e-197 692.2 463 70.4
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 5.4e-197 691.4 487 66.3
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.2e-196 690.3 656 55.3
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 1.0e-195 687.2 463 70.0
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 9.6e-194 680.6 436 70.9
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 2.8e-193 679.1 421 74.3
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 3.6e-193 678.7 421 74.3
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 1.8e-192 676.4 511 65.8
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 2.2e-190 669.5 458 67.7
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.1e-189 667.2 531 62.5
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 2.0e-183 646.4 472 63.3
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 2.9e-182 642.5 460 65.9
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 3.2e-181 639.0 471 68.2
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 1.8e-179 633.3 444 66.2
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 1.3e-177 627.1 462 64.3
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 5.8e-175 618.2 421 67.7
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 7.6e-175 617.8 465 61.5
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 3.8e-174 615.5 465 61.9
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 1.2e-172 610.5 451 63.2
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 1.5e-170 603.6 462 61.0
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.8e-168 596.7 463 60.3
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 1.7e-166 590.1 464 60.6
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.1e-164 583.2 466 59.7
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 1.0e-163 580.9 460 60.0
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 3.0e-163 579.3 453 59.4
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 7.7e-159 564.7 459 61.0
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.0e-158 564.3 346 75.1
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 3.1e-152 542.7 424 63.2
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 7.7e-151 538.1 460 57.0
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 9.7e-138 494.6 353 67.1
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.2e-132 477.6 389 62.0
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 5.9e-127 458.8 501 49.7
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 6.1e-116 422.2 347 63.1
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.0e-115 421.4 316 66.5
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 1.7e-113 414.1 260 73.1
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.6e-111 407.5 418 47.6
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.7e-100 369.4 258 66.7
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 2.9e-89 333.6 324 54.9
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 1.1e-88 331.6 255 59.6
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 2.7e-87 327.0 267 66.3
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 5.2e-83 312.8 214 65.0
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 3.9e-78 296.6 247 57.9
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 9.9e-66 255.4 214 63.1
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 8.7e-54 215.7 162 63.0
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 4.1e-51 206.8 144 65.3
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.9e-41 174.1 113 68.1
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 2.5e-40 171.0 183 51.4
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 1.1e-37 162.2 100 79.0
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 4.8e-36 156.8 178 49.4
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 1.4e-35 155.2 97 72.2
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 2.0e-34 151.4 115 60.9
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.8e-28 130.2 129 51.9
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 3.8e-17 94.0 57 78.9
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 5.5e-16 90.1 113 44.2
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 7.2e-16 89.7 57 63.2
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 6.3e-12 76.6 42 88.1
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 6.3e-12 76.6 42 88.1
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 1.4e-11 75.5 56 71.4
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 1.0e-06 59.3 60 55.0


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