Gene: Carub.0008s0926

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s0926
  • Transcript Identifier Carub.0008s0926.1
  • Gene Type Coding gene
  • Location scaffold_8 : 5893494-5897746 : negative

Gene Family Information

  • ID HOM05D000446
  • #Genes/#Species 1165/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s0926.v1.1
  • pacid 39250621
  • synonym Carubv10025920m.g

Descriptions

  • Description PTHR30620//PTHR30620:SF50 - PERIPLASMIC BETA-GLUCOSIDASE-RELATED // BETA-D-XYLOSIDASE 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0045493
IEA
InterProxylan catabolic process
GO:0010214
ISO
PLAZA Integrative Orthologyseed coat development AT5G49360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0009044
IEA
InterProxylan 1,4-beta-xylosidase activity
GO:0046556
ISO
PLAZA Integrative Orthologyalpha-L-arabinofuranosidase activity AT5G49360

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G49360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily
IPR026891 Fibronectin type III-like domain
IPR017853 Glycoside hydrolase superfamily
IPR044993 Beta-D-xylosidase
IPR001764 Glycoside hydrolase, family 3, N-terminal
IPR002772 Glycoside hydrolase family 3 C-terminal domain
IPR013783 Immunoglobulin-like fold
IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily
Mapman id Description
21.3.2.2.4.2 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)