Gene: Carub.0008s0467
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s0467
- Transcript Identifier Carub.0008s0467.1
- Gene Type Coding gene
- Location scaffold_8 : 2007793-2009729 : positive
Gene Family Information
- ID HOM05D005572
- #Genes/#Species 138/92
- Phylogenetic origin
- ID ORTHO05D007494
- #Genes/#Species 130/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0008s0467.v1.1
- pacid 39251559
- synonym Carubv10026616m.g
Descriptions
- Description 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0044237 | IEA | InterPro | cellular metabolic process | |
| GO:0044249 | IEA | InterPro | cellular biosynthetic process |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G05830 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000649 | Initiation factor 2B-related |
| IPR037171 | NagB/RpiA transferase-like |
| IPR042529 | Initiation factor 2B-like, C-terminal |
| IPR027363 | Methylthioribose-1-phosphate isomerase, N-terminal |
| IPR011559 | Initiation factor 2B alpha/beta/delta |
| IPR005251 | Methylthioribose-1-phosphate isomerase |
| Mapman id | Description |
|---|---|
| 4.1.2.2.6.4.3 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.methylthioribose-1-phosphate isomerase (MTI) |