Gene: Carub.0006s1814
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0006s1814
- Transcript Identifier Carub.0006s1814.1
- Gene Type Coding gene
- Location scaffold_6 : 6716610-6717368 : negative
Gene Family Information
- ID HOM05D001032
- #Genes/#Species 587/92
- Phylogenetic origin
- ID ORTHO05D000907
- #Genes/#Species 561/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0006s1814.v1.1
- pacid 39249666
- synonym Carubv10002733m.g
Descriptions
- Description PTHR31194//PTHR31194:SF5 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0000302 | ISO | PLAZA Integrative Orthology | response to reactive oxygen species | AT5G19790 |
| GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | AT5G19790 |
| GO:0048528 | ISO | PLAZA Integrative Orthology | post-embryonic root development | AT5G19790 |
| GO:0035865 | ISO | PLAZA Integrative Orthology | cellular response to potassium ion | AT5G19790 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT5G19790 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G19790 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |