Gene: AT5G19790
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G19790
- Transcript Identifier AT5G19790.1
- Gene Type Coding gene
- Location Chr5 : 6689271-6690032 : negative
Gene Family Information
- ID HOM05D001032
- #Genes/#Species 587/92
- Phylogenetic origin
- ID ORTHO05D000907
- #Genes/#Species 561/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G19790.1
- symbol RAP2.11
- uniprot Q6J9S1
Descriptions
- Description related to AP2 11
- Computational description related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | TAS, IEA | Gene Ontology | regulation of transcription, DNA-templated | 1 |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009873 | IEA | GOA Database | ethylene-activated signaling pathway | |
| GO:0048528 | IMP | Gene Ontology | post-embryonic root development | 2 |
| GO:0035865 | IEP | Gene Ontology | cellular response to potassium ion | 2 |
| GO:0009723 | IEP | Gene Ontology | response to ethylene | 2 |
| GO:0000302 | IEP | Gene Ontology | response to reactive oxygen species | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | TAS | Gene Ontology | DNA binding | 1 |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IDA ISS TAS | Gene Ontology | DNA-binding transcription factor activity | 1 2 3 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0043565 | IDA | Gene Ontology | sequence-specific DNA binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |