Gene: Carub.0006s0904

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0006s0904
Transcript Identifier Carub.0006s0904.1
Gene Type Coding gene
Location scaffold_6 : 3281177-3284451 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000446
#Genes/#Species 1165/97
Phylogenetic origin

ID ORTHO05D000321
#Genes/#Species 1120/97
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

id Carub.0006s0904.v1.1
pacid 39249079
synonym Carubv10000252m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR30620:SF19 - BETA-D-XYLOSIDASE 6-RELATED

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0045493	IEA	InterPro	xylan catabolic process

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004553	IEA	InterPro	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0009044	IEA	InterPro	xylan 1,4-beta-xylosidase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005774	ISO	PLAZA Integrative Orthology	vacuolar membrane	AT5G10560
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT5G10560

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002772	Glycoside hydrolase family 3 C-terminal domain
IPR036881	Glycoside hydrolase family 3 C-terminal domain superfamily
IPR026891	Fibronectin type III-like domain
IPR017853	Glycoside hydrolase superfamily
IPR001764	Glycoside hydrolase, family 3, N-terminal
IPR044993	Beta-D-xylosidase
IPR036962	Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR013783	Immunoglobulin-like fold

Mapman id	Description
21.3.2.2.4.2	Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)