Gene: Carub.0005s1507

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0005s1507
  • Transcript Identifier Carub.0005s1507.1
  • Gene Type Coding gene
  • Location scaffold_5 : 8155263-8159556 : positive

Gene Family Information

  • ID HOM05D007457
  • #Genes/#Species 103/83
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0005s1507.v1.1
  • pacid 39225597
  • synonym Carubv10016884m.g

Descriptions

  • Description PTHR11081//PTHR11081:SF17 - XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY // FLAP ENDONUCLEASE GEN-LIKE 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
ISO
PLAZA Integrative Orthologynucleic acid phosphodiester bond hydrolysis AT3G48900
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT3G48900
GO:0009650
ISO
PLAZA Integrative OrthologyUV protection AT3G48900
GO:0000723
ISO
PLAZA Integrative Orthologytelomere maintenance AT3G48900
GO:0006259
ISO
PLAZA Integrative OrthologyDNA metabolic process AT3G48900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
InterPronuclease activity
GO:0017108
ISO
PLAZA Integrative Orthology5'-flap endonuclease activity AT3G48900
GO:0008821
ISO
PLAZA Integrative Orthologycrossover junction endodeoxyribonuclease activity AT3G48900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006084 XPG/Rad2 endonuclease
IPR006086 XPG-I domain
IPR016197 Chromo-like domain superfamily
IPR006085 XPG, N-terminal
IPR029060 PIN-like domain superfamily
IPR036279 5'-3' exonuclease, C-terminal domain superfamily
Mapman id Description
13.3.5.5.2.4 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.Holliday junction resolvase (SEND1)