Gene: Carub.0004s2023

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0004s2023
  • Transcript Identifier Carub.0004s2023.1
  • Gene Type Coding gene
  • Location scaffold_4 : 11085583-11090805 : negative

Gene Family Information

  • ID HOM05D002100
  • #Genes/#Species 318/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0004s2023.v1.1
  • pacid 39239128
  • synonym Carubv10024748m.g

Descriptions

  • Description 3.5.4.17 - Adenosine-phosphate deaminase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032264
IEA
InterProIMP salvage
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT2G38280
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G38280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019239
IEA
InterProdeaminase activity
GO:0003876
IEA
InterProAMP deaminase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G38280
GO:0043424
ISO
PLAZA Integrative Orthologyprotein histidine kinase binding AT2G38280

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031307
ISO
PLAZA Integrative Orthologyintegral component of mitochondrial outer membrane AT2G38280
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G38280
GO:0043231
ISO
PLAZA Integrative Orthologyintracellular membrane-bounded organelle AT2G38280
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G38280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001365 Adenosine/AMP deaminase domain
IPR006329 AMP deaminase
IPR032466 Metal-dependent hydrolase
Mapman id Description
6.1.2.1.1 Nucleotide metabolism.purines.GMP biosynthesis.AMP deaminase activities.membrane-associated AMP deaminase (FAC1)