Gene: Carub.0003s2080

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s2080
  • Transcript Identifier Carub.0003s2080.1
  • Gene Type Coding gene
  • Location scaffold_3 : 7486619-7489225 : positive

Gene Family Information

  • ID HOM05D000138
  • #Genes/#Species 2624/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s2080.v1.1
  • pacid 39242445
  • synonym Carubv10015558m.g

Descriptions

  • Description PTHR32467:SF22 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT3G20840
GO:0019827
ISO
PLAZA Integrative Orthologystem cell population maintenance AT3G20840
GO:0010449
ISO
PLAZA Integrative Orthologyroot meristem growth AT3G20840
GO:0007389
ISO
PLAZA Integrative Orthologypattern specification process AT3G20840
GO:0000723
ISO
PLAZA Integrative Orthologytelomere maintenance AT3G20840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G20840
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G20840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G20840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016177 DNA-binding domain superfamily
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
Mapman id Description
15.5.7.3 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2)