Gene: Carub.0003s0951
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s0951
- Transcript Identifier Carub.0003s0951.1
- Gene Type Coding gene
- Location scaffold_3 : 3261307-3263143 : positive
Gene Family Information
- ID HOM05D001573
- #Genes/#Species 406/100
- Phylogenetic origin
- ID ORTHO05D001660
- #Genes/#Species 373/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0003s0951.v1.1
- pacid 39241919
- synonym Carubv10014225m.g
Descriptions
- Description K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006352 | IEA | InterPro | DNA-templated transcription, initiation | |
| GO:0070897 | IEA | InterPro | transcription preinitiation complex assembly | |
| GO:0055046 | ISO | PLAZA Integrative Orthology | microgametogenesis | AT3G57370 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT3G57370 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017025 | IEA | InterPro | TBP-class protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G10330 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G10330 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.3.3.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.basal transcription factor (TFIIb) |