Gene: Carub.0002s2237

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0002s2237
  • Transcript Identifier Carub.0002s2237.1
  • Gene Type Coding gene
  • Location scaffold_2 : 11964916-11966560 : negative

Gene Family Information

  • ID HOM05D002519
  • #Genes/#Species 269/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0002s2237.v1.1
  • pacid 39245259
  • synonym Carubv10020792m.g

Descriptions

  • Description K03139 - transcription initiation factor TFIIF subunit beta (TFIIF2, GTF2F2, TFG2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0006366
IEA
InterProtranscription by RNA polymerase II

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005674
IEA
InterProtranscription factor TFIIF complex
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G75510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR011039 Transcription Factor IIF, Rap30/Rap74, interaction
IPR040450 TFIIF beta subunit, HTH domain
IPR003196 Transcription initiation factor IIF, beta subunit
Mapman id Description
15.3.3.4.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit beta