Gene: Carub.0001s3360

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s3360
  • Transcript Identifier Carub.0001s3360.1
  • Gene Type Coding gene
  • Location scaffold_1 : 12966290-12974079 : positive

Gene Family Information

  • ID HOM05D003397
  • #Genes/#Species 201/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s3360.v1.1
  • pacid 39231256
  • synonym Carubv10011872m.g

Descriptions

  • Description 6.3.4.14 - Biotin carboxylase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006633
IEA
InterProfatty acid biosynthetic process
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G36160
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G36160
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT1G36160
GO:0010072
ISO
PLAZA Integrative Orthologyprimary shoot apical meristem specification AT1G36160
GO:0009631
ISO
PLAZA Integrative Orthologycold acclimation AT1G36160
GO:0030497
ISO
PLAZA Integrative Orthologyfatty acid elongation AT1G36160
GO:0009933
ISO
PLAZA Integrative Orthologymeristem structural organization AT1G36160
GO:0009735
ISO
PLAZA Integrative Orthologyresponse to cytokinin AT1G36160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003989
IEA
InterProacetyl-CoA carboxylase activity
GO:0005524
IEA
InterProATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G36160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034733 Acetyl-CoA carboxylase
IPR029045 ClpP/crotonase-like domain superfamily
IPR011053 Single hybrid motif
IPR000089 Biotin/lipoyl attachment
IPR005482 Biotin carboxylase, C-terminal
IPR013537 Acetyl-CoA carboxylase, central domain
IPR011054 Rudiment single hybrid motif
Mapman id Description
5.1.3.1 Lipid metabolism.fatty acid biosynthesis.acetyl-CoA carboxylation.monomeric acetyl-CoA carboxylase
9.2.2.1.4 Secondary metabolism.phenolics.flavonoid biosynthesis.polyketide/acetate pathway.acetyl-CoA carboxylase (ACC)