Gene: Carub.0001s1575

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s1575
  • Transcript Identifier Carub.0001s1575.1
  • Gene Type Coding gene
  • Location scaffold_1 : 5549390-5552204 : positive

Gene Family Information

  • ID HOM05D000089
  • #Genes/#Species 3531/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s1575.v1.1
  • pacid 39231492
  • synonym Carubv10009629m.g

Descriptions

  • Description K09753 - cinnamoyl-CoA reductase (CCR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G15950
GO:0009809
ISO
PLAZA Integrative Orthologylignin biosynthetic process Zm00001eb041120
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT1G15950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os02g0808800
GO:0016621
ISO
PLAZA Integrative Orthologycinnamoyl-CoA reductase activity AT1G15950

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os02g0808800
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G15950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001509 NAD-dependent epimerase/dehydratase
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
21.6.1.5 Cell wall organisation.lignin.monolignol biosynthesis.cinnamoyl-CoA reductase (CCR)