Gene: AT1G15950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G15950
  • Transcript Identifier AT1G15950.1
  • Gene Type Coding gene
  • Location Chr1 : 5478855-5481915 : positive

Gene Family Information

  • ID HOM05D000089
  • #Genes/#Species 3531/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G15950.1
  • symbol CCR1
  • Alias ATCCR1,IRX4,IRREGULAR XYLEM 4
  • uniprot Q9S9N9

Descriptions

  • Description cinnamoyl coa reductase 1
  • Computational description cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 12077 Blast hits to 12065 proteins in 1900 species: Archae - 220; Bacteria - 5385; Metazoa - 413; Fungi - 986; Plants - 2545; Viruses - 54; Other Eukaryotes - 2474 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009809
IEA
GOA Databaselignin biosynthetic process
GO:0009809
IDA
Gene Ontologylignin biosynthetic process1
GO:0007623
IEP
Gene Ontologycircadian rhythm2
GO:0009409
IEP
Gene Ontologyresponse to cold2
GO:0009699
IEA
GOA Databasephenylpropanoid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
Gene Ontologycatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016621
IEA
GOA Databasecinnamoyl-CoA reductase activity
GO:0016621
IDA
Gene Ontologycinnamoyl-CoA reductase activity1
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016616
IBA
GOA Databaseoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os02g0808800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
GOA Databasecytosol
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os02g0808800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036291 NAD(P)-binding domain superfamily
IPR001509 NAD-dependent epimerase/dehydratase
Mapman id Description
21.6.1.5 Cell wall organisation.lignin.monolignol biosynthesis.cinnamoyl-CoA reductase (CCR)