Gene: AT1G15950
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G15950
- Transcript Identifier AT1G15950.1
- Gene Type Coding gene
- Location Chr1 : 5478855-5481915 : positive
Gene Family Information
- ID HOM05D000089
- #Genes/#Species 3531/98
- Phylogenetic origin
- ID ORTHO05D000104
- #Genes/#Species 2057/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G15950.1
- symbol CCR1
- Alias ATCCR1,IRX4,IRREGULAR XYLEM 4
- uniprot Q9S9N9
Descriptions
- Description cinnamoyl coa reductase 1
- Computational description cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 12077 Blast hits to 12065 proteins in 1900 species: Archae - 220; Bacteria - 5385; Metazoa - 413; Fungi - 986; Plants - 2545; Viruses - 54; Other Eukaryotes - 2474 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009809 | IEA | GOA Database | lignin biosynthetic process | |
GO:0009809 | IDA | Gene Ontology | lignin biosynthetic process | 1 |
GO:0007623 | IEP | Gene Ontology | circadian rhythm | 2 |
GO:0009409 | IEP | Gene Ontology | response to cold | 2 |
GO:0009699 | IEA | GOA Database | phenylpropanoid biosynthetic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003824 | IEA | Gene Ontology | catalytic activity | |
GO:0003824 | IEA | InterPro | catalytic activity | |
GO:0016621 | IEA | GOA Database | cinnamoyl-CoA reductase activity | |
GO:0016621 | IDA | Gene Ontology | cinnamoyl-CoA reductase activity | 1 |
GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
GO:0016616 | IBA | GOA Database | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Os02g0808800 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | IDA | GOA Database | cytosol | |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | Os02g0808800 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
21.6.1.5 | Cell wall organisation.lignin.monolignol biosynthesis.cinnamoyl-CoA reductase (CCR) |