Gene: Carub.0001s1347
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0001s1347
- Transcript Identifier Carub.0001s1347.1
- Gene Type Coding gene
- Location scaffold_1 : 4801214-4803214 : positive
Gene Family Information
- ID HOM05D000622
- #Genes/#Species 916/100
- Phylogenetic origin
- ID ORTHO05D000475
- #Genes/#Species 879/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0001s1347.v1.1
- pacid 39229746
- synonym Carubv10011148m.g
Descriptions
- Description PTHR10693//PTHR10693:SF27 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G13730 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR039539 | Ras GTPase-activating protein-binding protein |
| IPR035979 | RNA-binding domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR002075 | Nuclear transport factor 2 |
| IPR018222 | Nuclear transport factor 2, eukaryote |
| IPR032710 | NTF2-like domain superfamily |
| Mapman id | Description |
|---|---|
| 16.8.1 | RNA processing.mRNA sequestration.mRNA endoribonuclease (G3BP) |