Gene: CSS0043547
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0043547
- Transcript Identifier CSS0043547.1
- Gene Type Coding gene
- Location Chr12 : 144308865-144319233 : negative
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0043547.1
Descriptions
- Description SOC1-like protein [Rosa hybrid cultivar]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0080187 | ISO | PLAZA Integrative Orthology | floral organ senescence | AT5G62165 |
GO:0010048 | ISO | PLAZA Integrative Orthology | vernalization response | AT4G22950 |
GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT4G11880 |
GO:2000012 | ISO | PLAZA Integrative Orthology | regulation of auxin polar transport | AT4G11880 |
GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT4G22950 |
GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT5G51860 |
GO:0009838 | ISO | PLAZA Integrative Orthology | abscission | AT5G62165 |
GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT5G62165 |
GO:0010082 | ISO | PLAZA Integrative Orthology | regulation of root meristem growth | AT4G11880 |
GO:0010076 | ISO | PLAZA Integrative Orthology | maintenance of floral meristem identity | AT4G11880 |
GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G11880 |
GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G11880 |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
GO:0046983 | IEA | InterPro | protein dimerization activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G11880 |
GO:0005634 | IEA | InterPro | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |