Gene: AT5G51860

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G51860
  • Transcript Identifier AT5G51860.2
  • Gene Type Coding gene
  • Location Chr5 : 21081844-21084126 : negative

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G51860.2
  • symbol AGL72
  • full_name AGAMOUS-like 72
  • uniprot Q9FLH5

Descriptions

  • Description K-box region and MADS-box transcription factor family protein
  • Computational description K-box region and MADS-box transcription factor family protein ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: embryo; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1); Has 6804 Blast hits to 6802 proteins in 884 species: Archae - 0; Bacteria - 0; Metazoa - 630; Fungi - 309; Plants - 5790; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
  • Computational description K-box region and MADS-box transcription factor family protein ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: embryo; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1); Has 6927 Blast hits to 6925 proteins in 893 species: Archae - 0; Bacteria - 0; Metazoa - 635; Fungi - 318; Plants - 5897; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030154
IEA
GOA Databasecell differentiation
GO:0045944
IEA
Gene Ontologypositive regulation of transcription by RNA polymerase II
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009908
IEA
GOA Databaseflower development
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:0009909
IMP
Gene Ontologyregulation of flower development2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000977
IEA
GOA DatabaseRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity3
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding1
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036879 Transcription factor, MADS-box superfamily
IPR002100 Transcription factor, MADS-box
IPR002487 Transcription factor, K-box
IPR033896 MADS MEF2-like
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)