Gene: CSS0028066

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0028066
  • Transcript Identifier CSS0028066.1
  • Gene Type Coding gene
  • Location Chr10 : 5312835-5327453 : positive

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0028066.1

Descriptions

  • Description MADS-box protein AGL2 subfamily [Coffea arabica]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010364
ISO
PLAZA Integrative Orthologyregulation of ethylene biosynthetic process Solyc05g012020.4
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT1G24260
GO:0001708
ISO
PLAZA Integrative Orthologycell fate specification AT1G24260
GO:0010214
ISO
PLAZA Integrative Orthologyseed coat development AT1G24260
GO:0048833
ISO
PLAZA Integrative Orthologyspecification of floral organ number AT1G24260
GO:0080001
ISO
PLAZA Integrative Orthologymucilage extrusion from seed coat AT1G24260
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G24260
GO:0010093
ISO
PLAZA Integrative Orthologyspecification of floral organ identity AT1G24260
GO:0009836
ISO
PLAZA Integrative Orthologyfruit ripening, climacteric Solyc05g012020.4
GO:0016117
ISO
PLAZA Integrative Orthologycarotenoid biosynthetic process Solyc05g012020.4
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G24260
GO:0003677
IEA
InterProDNA binding
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046983
IEA
InterProprotein dimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036879 Transcription factor, MADS-box superfamily
IPR002487 Transcription factor, K-box
IPR002100 Transcription factor, MADS-box
IPR033896 MADS MEF2-like
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)