Gene: CSS0002848
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0002848
- Transcript Identifier CSS0002848.1
- Gene Type Coding gene
- Location Contig1039 : 610814-632854 : positive
Gene Family Information
- ID HOM05D003609
- #Genes/#Species 190/98
- Phylogenetic origin
- ID ORTHO05D004185
- #Genes/#Species 188/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0002848.1
Descriptions
- Description PREDICTED: DNA damage-binding protein 1 [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT4G05420 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G21100 |
| GO:0010100 | ISO | PLAZA Integrative Orthology | negative regulation of photomorphogenesis | AT4G05420 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003684 | ISO | PLAZA Integrative Orthology | damaged DNA binding | Os05g0592400 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G05420 |
| GO:0080008 | ISO | PLAZA Integrative Orthology | Cul4-RING E3 ubiquitin ligase complex | AT4G05420 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR004871 | Cleavage/polyadenylation specificity factor, A subunit, C-terminal |
| IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR018846 | Cleavage/polyadenylation specificity factor, A subunit, N-terminal |
| Mapman id | Description |
|---|---|
| 14.6.1.3.1 | DNA damage response.nucleotide excision repair (NER).global genome nucleotide excision repair (GG-NER).UV-damaged DNA-binding protein (UV-DDB) heterodimer.ubiquitination complex adapter component DDB1 |
| 19.2.2.8.3.2 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.core adapter component DDB1 |