Gene: COL.COLO4_38557

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_38557
  • Transcript Identifier COL.rna37228
  • Gene Type Coding gene
  • Location AWUE01024880.1 : 2702-3640 : negative

Gene Family Information

  • ID HOM05D000479
  • #Genes/#Species 1104/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna37228
  • GenBank OMO49432.1
  • id gene38529
  • gene_name COLO4_38557
  • uniprot A0A1R3FU91

Descriptions

  • Description Ribonuclease CAF1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090503
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, exonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004535
IEA
GOA Databasepoly(A)-specific ribonuclease activity
GO:0004535
IEA
InterPropoly(A)-specific ribonuclease activity
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0030014
IEA
GOA DatabaseCCR4-NOT complex
GO:0030014
IEA
InterProCCR4-NOT complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR006941 Ribonuclease CAF1
IPR012337 Ribonuclease H-like superfamily
IPR039637 CCR4-NOT transcription complex subunit 7/8/Pop2
Mapman id Description
35.1 not assigned.annotated