Gene: COL.COLO4_37172

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_37172
  • Transcript Identifier COL.rna35853
  • Gene Type Coding gene
  • Location AWUE01023851.1 : 108874-112861 : negative

Gene Family Information

  • ID HOM05D001300
  • #Genes/#Species 483/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna35853
  • GenBank OMO52485.1
  • id gene37144
  • gene_name COLO4_37172
  • uniprot A0A1R3G341

Descriptions

  • Description Aspartyl/Asparaginyl-tRNA synthetase, class IIb
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT4G17300
GO:0006421
IEA
GOA Databaseasparaginyl-tRNA aminoacylation
GO:0006421
IEA
InterProasparaginyl-tRNA aminoacylation
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004816
IEA
GOA Databaseasparagine-tRNA ligase activity
GO:0004816
IEA
InterProasparagine-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G17300
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G17300
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G17300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR012340 Nucleic acid-binding, OB-fold
IPR004522 Asparagine-tRNA ligase
Mapman id Description
17.2.3 Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase