Gene: COL.COLO4_36716
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_36716
- Transcript Identifier COL.rna35397
- Gene Type Coding gene
- Location AWUE01023516.1 : 31-561 : negative
Gene Family Information
- ID HOM05D000233
- #Genes/#Species 1790/97
- Phylogenetic origin
- ID ORTHO05D000020
- #Genes/#Species 4054/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna35397
- GenBank OMO53496.1
- id gene36688
- gene_name COLO4_36716
- uniprot A0A1R3G616
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048825 | ISO | PLAZA Integrative Orthology | cotyledon development | AT4G23750 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT1G72360 |
| GO:0019760 | ISO | PLAZA Integrative Orthology | glucosinolate metabolic process | AT5G44210 |
| GO:0070483 | ISO | PLAZA Integrative Orthology | detection of hypoxia | AT1G53910 |
| GO:0071456 | ISO | PLAZA Integrative Orthology | cellular response to hypoxia | AT1G72360 |
| GO:0010337 | ISO | PLAZA Integrative Orthology | regulation of salicylic acid metabolic process | Os01g0797600 |
| GO:0010311 | ISO | PLAZA Integrative Orthology | lateral root formation | Os01g0797600 |
| GO:0080141 | ISO | PLAZA Integrative Orthology | regulation of jasmonic acid biosynthetic process | Os01g0797600 |
| GO:0009864 | ISO | PLAZA Integrative Orthology | induced systemic resistance, jasmonic acid mediated signaling pathway | AT3G15210 |
| GO:0080027 | ISO | PLAZA Integrative Orthology | response to herbivore | Os01g0797600 |
| GO:0009625 | ISO | PLAZA Integrative Orthology | response to insect | Os01g0797600 |
| GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | Solyc07g053740.1 |
| GO:0071454 | ISO | PLAZA Integrative Orthology | cellular response to anoxia | AT1G72360 |
| GO:0010728 | ISO | PLAZA Integrative Orthology | regulation of hydrogen peroxide biosynthetic process | Os01g0797600 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT3G15210 |
| GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | AT3G14230 |
| GO:0071369 | ISO | PLAZA Integrative Orthology | cellular response to ethylene stimulus | AT1G72360 |
| GO:0010105 | ISO | PLAZA Integrative Orthology | negative regulation of ethylene-activated signaling pathway | AT3G15210 |
| GO:0010104 | ISO | PLAZA Integrative Orthology | regulation of ethylene-activated signaling pathway | Solyc10g009110.1 |
| GO:2000068 | ISO | PLAZA Integrative Orthology | regulation of defense response to insect | Os01g0797600 |
| GO:0034059 | ISO | PLAZA Integrative Orthology | response to anoxia | AT1G72360 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT3G15210 |
| GO:0010364 | ISO | PLAZA Integrative Orthology | regulation of ethylene biosynthetic process | Os01g0797600 |
| GO:0080113 | ISO | PLAZA Integrative Orthology | regulation of seed growth | Os01g0797600 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:2000280 | ISO | PLAZA Integrative Orthology | regulation of root development | AT1G53910 |
| GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT1G28370 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | Os01g0797600 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | Os01g0797600 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | Os01g0797600 |
| GO:0009873 | ISO | PLAZA Integrative Orthology | ethylene-activated signaling pathway | AT5G44210 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | Os01g0797600 |
| GO:0009735 | ISO | PLAZA Integrative Orthology | response to cytokinin | Os01g0797600 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | Solyc07g053740.1 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Os01g0797600 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT4G23750 |
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT1G28370 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | Os01g0797600 |
| GO:0001666 | ISO | PLAZA Integrative Orthology | response to hypoxia | AT1G53910 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT5G44210 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT4G23750 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G44210 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G44210 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT1G72360 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005622 | ISO | PLAZA Integrative Orthology | intracellular anatomical structure | AT5G44210 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G53910 |
| GO:0016604 | ISO | PLAZA Integrative Orthology | nuclear body | AT3G15210 |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.7.1 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF) |