Gene: COL.COLO4_36071
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_36071
- Transcript Identifier COL.rna34758
- Gene Type Coding gene
- Location AWUE01022991.1 : 55681-59305 : positive
Gene Family Information
- ID HOM05D001702
- #Genes/#Species 381/98
- Phylogenetic origin
- ID ORTHO05D001791
- #Genes/#Species 355/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna34758
- GenBank OMO55299.1
- id gene36043
- gene_name COLO4_36071
- uniprot A0A1R3GB32
Descriptions
- Description Dehydroquinase class I
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009423 | IEA | GOA Database | chorismate biosynthetic process | |
| GO:0008652 | IEA | GOA Database | cellular amino acid biosynthetic process | |
| GO:0009073 | IEA | GOA Database | aromatic amino acid family biosynthetic process | |
| GO:0019632 | IEA | GOA Database | shikimate metabolic process | |
| GO:0019632 | IEA | InterPro | shikimate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004764 | IEA | GOA Database | shikimate 3-dehydrogenase (NADP+) activity | |
| GO:0004764 | IEA | InterPro | shikimate 3-dehydrogenase (NADP+) activity | |
| GO:0050661 | IEA | GOA Database | NADP binding | |
| GO:0050661 | IEA | InterPro | NADP binding | |
| GO:0003855 | IEA | GOA Database | 3-dehydroquinate dehydratase activity | |
| GO:0003855 | IEA | InterPro | 3-dehydroquinate dehydratase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001381 | 3-dehydroquinate dehydratase type I |
| IPR006151 | Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase |
| IPR036291 | NAD(P)-binding domain superfamily |
| IPR011342 | Shikimate dehydrogenase |
| IPR022893 | Shikimate dehydrogenase family |
| IPR013708 | Shikimate dehydrogenase substrate binding, N-terminal |
| IPR013785 | Aldolase-type TIM barrel |
| Mapman id | Description |
|---|---|
| 4.1.5.1.3 | Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase |