Gene: COL.COLO4_35727

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_35727
  • Transcript Identifier COL.rna34415
  • Gene Type Coding gene
  • Location AWUE01022783.1 : 29169-31653 : negative

Gene Family Information

  • ID HOM05D000051
  • #Genes/#Species 4432/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna34415
  • GenBank OMO56229.1
  • id gene35699
  • gene_name COLO4_35727
  • uniprot A0A1R3GDR7

Descriptions

  • Description Leucine-rich repeat 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010187
ISO
PLAZA Integrative Orthologynegative regulation of seed germination AT1G55660
GO:0048587
ISO
PLAZA Integrative Orthologyregulation of short-day photoperiodism, flowering AT1G55660
GO:1902584
ISO
PLAZA Integrative Orthologypositive regulation of response to water deprivation AT1G55660
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering AT1G55660
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT1G55660
GO:1901527
ISO
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway involved in stomatal movement AT1G55660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G15620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT5G38590
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G11370
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G47920
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G25860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013101 Leucine-rich repeat 2
IPR032675 Leucine-rich repeat domain superfamily
Mapman id Description
35.1 not assigned.annotated