Gene: AT1G55660

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G55660
  • Transcript Identifier AT1G55660.2
  • Gene Type Coding gene
  • Location Chr1 : 20800694-20801788 : positive

Gene Family Information

  • ID HOM05D000051
  • #Genes/#Species 4432/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G55660.2
  • uniprot Q1PFK0

Descriptions

  • Description FBD, F-box and Leucine Rich Repeat domains containing protein
  • Computational description FBD, F-box and Leucine Rich Repeat domains containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT4G00315.1); Has 2322 Blast hits to 2273 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 68; Fungi - 4; Plants - 2247; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
  • Computational description FBD, F-box and Leucine Rich Repeat domains containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT4G00315.1).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048579
IGI
Gene Ontologynegative regulation of long-day photoperiodism, flowering1
GO:0048587
IGI
Gene Ontologyregulation of short-day photoperiodism, flowering1
GO:2000028
IMP
Gene Ontologyregulation of photoperiodism, flowering1
GO:0010187
IMP
Gene Ontologynegative regulation of seed germination2
GO:1901527
IMP
Gene Ontologyabscisic acid-activated signaling pathway involved in stomatal movement2
GO:1902584
IMP
Gene Ontologypositive regulation of response to water deprivation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013101 Leucine-rich repeat 2
IPR001810 F-box domain
IPR032675 Leucine-rich repeat domain superfamily
IPR036047 F-box-like domain superfamily
Mapman id Description
35.1 not assigned.annotated