Gene: COL.COLO4_34565

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_34565
  • Transcript Identifier COL.rna33256
  • Gene Type Coding gene
  • Location AWUE01022413.1 : 12762-24012 : positive

Gene Family Information

  • ID HOM05D000058
  • #Genes/#Species 4266/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna33256
  • GenBank OMO58499.1
  • id gene34537
  • gene_name COLO4_34565
  • uniprot A0A1R3GKC6

Descriptions

  • Description Glycoside hydrolase, family 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050826
ISO
PLAZA Integrative Orthologyresponse to freezing AT3G06510
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G06510
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016798
ISO
PLAZA Integrative Orthologyhydrolase activity, acting on glycosyl bonds AT3G06510
GO:0008378
ISO
PLAZA Integrative Orthologygalactosyltransferase activity AT3G06510
GO:0008422
ISO
PLAZA Integrative Orthologybeta-glucosidase activity AT3G06510
GO:0080079
ISO
PLAZA Integrative Orthologycellobiose glucosidase activity AT3G06510
GO:0016757
ISO
PLAZA Integrative Orthologyglycosyltransferase activity AT3G06510
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004185
IEA
GOA Databaseserine-type carboxypeptidase activity
GO:0004185
IEA
InterProserine-type carboxypeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009707
ISO
PLAZA Integrative Orthologychloroplast outer membrane AT3G06510
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT3G06510
GO:0031359
ISO
PLAZA Integrative Orthologyintegral component of chloroplast outer membrane AT3G06510
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G06510
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G06510
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001563 Peptidase S10, serine carboxypeptidase
IPR014002 Agenet domain, plant type
IPR029058 Alpha/Beta hydrolase fold
IPR001360 Glycoside hydrolase family 1
IPR008395 Agenet-like domain
IPR017853 Glycoside hydrolase superfamily
Mapman id Description
12.3.3.9.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.histone methylation reader activities.histone H3K9 methylation reader (AGDP1)
19.4.2.2 Protein homeostasis.proteolysis.serine-type peptidase activities.S10-class serine carboxypeptidase (SCPL)
5.3.4 Lipid metabolism.galactolipid and sulfolipid biosynthesis.galactolipid galactosyltransferase (SFR2)