Gene: COL.COLO4_33274
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_33274
- Transcript Identifier COL.rna31978
- Gene Type Coding gene
- Location AWUE01021509.1 : 38409-46939 : negative
Gene Family Information
- ID HOM05D000189
- #Genes/#Species 2040/100
- Phylogenetic origin
- ID ORTHO05D000474
- #Genes/#Species 882/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna31978
- GenBank OMO62014.1
- id gene33246
- gene_name COLO4_33274
- uniprot A0A1R3GV88
Descriptions
- Description Zinc finger, FYVE-type
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0005085 | ISO | PLAZA Integrative Orthology | guanyl-nucleotide exchange factor activity | AT1G76950 |
| GO:0035091 | ISO | PLAZA Integrative Orthology | phosphatidylinositol binding | AT1G76950 |
| GO:0070300 | ISO | PLAZA Integrative Orthology | phosphatidic acid binding | AT1G76950 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G12350 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027988 | Transcription factor BREVIS RADIX, N-terminal domain |
| IPR013591 | Brevis radix (BRX) domain |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR000306 | FYVE zinc finger |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR000408 | Regulator of chromosome condensation, RCC1 |
| IPR001849 | Pleckstrin homology domain |
| IPR009091 | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II |
| IPR011993 | PH-like domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |