Gene: COL.COLO4_30791

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_30791
  • Transcript Identifier COL.rna29506
  • Gene Type Coding gene
  • Location AWUE01020789.1 : 61850-66098 : positive

Gene Family Information

  • ID HOM05D001722
  • #Genes/#Species 376/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna29506
  • GenBank OMO66077.1
  • id gene30763
  • gene_name COLO4_30791
  • uniprot A0A1R3H6U2

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034063
ISO
PLAZA Integrative Orthologystress granule assembly AT3G14100
GO:0071456
ISO
PLAZA Integrative Orthologycellular response to hypoxia AT3G14100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G54080
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G14100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G14100
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G14100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.8.3 RNA processing.mRNA sequestration.mRNA-binding regulatory factor (UBP1)