Gene: COL.COLO4_30111

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_30111
  • Transcript Identifier COL.rna28828
  • Gene Type Coding gene
  • Location AWUE01020593.1 : 70912-74954 : negative

Gene Family Information

  • ID HOM05D003444
  • #Genes/#Species 198/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna28828
  • GenBank OMO67553.1
  • id gene30083
  • gene_name COLO4_30111
  • uniprot A0A1R3HBA9

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0080009
IEA
GOA DatabasemRNA methylation
GO:0080009
IEA
InterPromRNA methylation
GO:0000381
IEA
GOA Databaseregulation of alternative mRNA splicing, via spliceosome
GO:0000381
IEA
InterProregulation of alternative mRNA splicing, via spliceosome
GO:0001510
ISO
PLAZA Integrative OrthologyRNA methylation AT3G54170
GO:0010073
ISO
PLAZA Integrative Orthologymeristem maintenance AT3G54170

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT3G54170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G54170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029732 WTAP/Mum2 family
IPR033757 Pre-mRNA-splicing regulator WTAP
IPR036047 F-box-like domain superfamily
IPR001810 F-box domain
Mapman id Description
16.5.8.1.1.3 RNA processing.RNA modification.mRNA methylation.adenosine N6-methylation.adenosine N6-methyltransferase complex.regulatory component FIP37