Gene: COL.COLO4_29354

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_29354
  • Transcript Identifier COL.rna28071
  • Gene Type Coding gene
  • Location AWUE01020332.1 : 6834-9497 : negative

Gene Family Information

  • ID HOM05D004581
  • #Genes/#Species 158/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna28071
  • GenBank OMO68897.1
  • id gene29326
  • gene_name COLO4_29354
  • uniprot A0A1R3HEV3

Descriptions

  • Description Spc97/Spc98
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009624
ISO
PLAZA Integrative Orthologyresponse to nematode AT5G06680
GO:0090063
ISO
PLAZA Integrative Orthologypositive regulation of microtubule nucleation AT5G06680
GO:0007020
IEA
GOA Databasemicrotubule nucleation
GO:0007020
IEA
InterPromicrotubule nucleation
GO:0000226
IEA
GOA Databasemicrotubule cytoskeleton organization
GO:0000226
IEA
InterPromicrotubule cytoskeleton organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G06680
GO:0043015
IEA
GOA Databasegamma-tubulin binding
GO:0043015
IEA
InterProgamma-tubulin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005815
IEA
GOA Databasemicrotubule organizing center
GO:0005815
IEA
InterPromicrotubule organizing center
GO:0009898
ISO
PLAZA Integrative Orthologycytoplasmic side of plasma membrane AT5G06680
GO:0055028
ISO
PLAZA Integrative Orthologycortical microtubule AT5G06680
GO:0000930
ISO
PLAZA Integrative Orthologygamma-tubulin complex AT5G06680
GO:0005819
ISO
PLAZA Integrative Orthologyspindle AT5G06680
GO:0005938
ISO
PLAZA Integrative Orthologycell cortex AT5G06680
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT5G06680
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0000922
IEA
GOA Databasespindle pole
GO:0000922
IEA
InterProspindle pole
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005874
IEA
GOA Databasemicrotubule

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040457 Gamma tubulin complex component, C-terminal
IPR007259 Gamma-tubulin complex component protein
IPR042241 Gamma-tubulin complex, C-terminal domain superfamily
IPR041470 Gamma tubulin complex component protein, N-terminal
Mapman id Description
20.1.2.1.3 Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).component GCP3