Gene: COL.COLO4_25928
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_25928
- Transcript Identifier COL.rna24659
- Gene Type Coding gene
- Location AWUE01019187.1 : 14565-15458 : negative
Gene Family Information
- ID HOM05D000479
- #Genes/#Species 1104/98
- Phylogenetic origin
- ID ORTHO05D029092
- #Genes/#Species 4/1
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna24659
- GenBank OMO75701.1
- id gene25900
- gene_name COLO4_25928
- uniprot A0A1R3HZM2
Descriptions
- Description Ribonuclease CAF1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
| GO:0090503 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, exonucleolytic |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004535 | IEA | GOA Database | poly(A)-specific ribonuclease activity | |
| GO:0004535 | IEA | InterPro | poly(A)-specific ribonuclease activity | |
| GO:0004527 | IEA | GOA Database | exonuclease activity | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0030014 | IEA | GOA Database | CCR4-NOT complex | |
| GO:0030014 | IEA | InterPro | CCR4-NOT complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |