Gene: COL.COLO4_22425

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_22425
  • Transcript Identifier COL.rna21173
  • Gene Type Coding gene
  • Location AWUE01017966.1 : 58933-60324 : negative

Gene Family Information

  • ID HOM05D000242
  • #Genes/#Species 1731/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna21173
  • GenBank OMO83593.1
  • id gene22397
  • gene_name COLO4_22425
  • uniprot A0A1R3IM11

Descriptions

  • Description Glycoside hydrolase, family 19, catalytic
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016998
IEA
GOA Databasecell wall macromolecule catabolic process
GO:0016998
IEA
InterProcell wall macromolecule catabolic process
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G12500
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G12500
GO:0006040
ISO
PLAZA Integrative Orthologyamino sugar metabolic process Os03g0418000
GO:0009871
ISO
PLAZA Integrative Orthologyjasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway AT3G12500
GO:0006032
IEA
GOA Databasechitin catabolic process
GO:0006032
IEA
InterProchitin catabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008843
ISO
PLAZA Integrative Orthologyendochitinase activity Os03g0418000
GO:0016231
ISO
PLAZA Integrative Orthologybeta-N-acetylglucosaminidase activity Os03g0418000
GO:0008061
IEA
GOA Databasechitin binding
GO:0008061
IEA
InterProchitin binding
GO:0004568
IEA
GOA Databasechitinase activity
GO:0004568
IEA
InterProchitinase activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT3G12500
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G12500
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G12500
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G12500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016283 Glycoside hydrolase, family 19
IPR001002 Chitin-binding, type 1
IPR000726 Glycoside hydrolase, family 19, catalytic
IPR023346 Lysozyme-like domain superfamily
IPR036861 Endochitinase-like superfamily
Mapman id Description
35.1 not assigned.annotated