Gene: AT3G12500

General Information

tid AT3G12500.1
symbol HCHIB
Alias ATHCHIB,basic chitinase,B-CHI,CHI-B,PR-3,PATHOGENESIS-RELATED 3,PR3,PATHOGENESIS-RELATED 3
uniprot P19171

Computational description basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink).

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006952	IEA	GOA Database	defense response
GO:0008152	IEA	GOA Database	metabolic process
GO:0050832	IEA	GOA Database	defense response to fungus
GO:0050832	IDA IBA	Gene Ontology	defense response to fungus	1
GO:0009626	IEA	GOA Database	plant-type hypersensitive response
GO:0031640	IEA	GOA Database	killing of cells of other organism
GO:0000272	IEA	GOA Database	polysaccharide catabolic process
GO:0006032	IEA	GOA Database	chitin catabolic process
GO:0006032	IEA	InterPro	chitin catabolic process
GO:0016998	IEA	Gene Ontology	cell wall macromolecule catabolic process
GO:0016998	IEA	InterPro	cell wall macromolecule catabolic process
GO:0005975	IEA	GOA Database	carbohydrate metabolic process
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0006040	ISO	PLAZA Integrative Orthology	amino sugar metabolic process	Os03g0418000
GO:0009871	IGI	Gene Ontology	jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	2
GO:0046686	IEP	GOA Database	response to cadmium ion

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008061	IEA	GOA Database	chitin binding
GO:0008061	IEA	InterPro	chitin binding
GO:0016798	IEA	GOA Database	hydrolase activity, acting on glycosyl bonds
GO:0016787	IEA	GOA Database	hydrolase activity
GO:0004568	IEA	GOA Database	chitinase activity
GO:0004568	IDA IBA	Gene Ontology	chitinase activity	1
GO:0004568	IEA	InterPro	chitinase activity
GO:0016231	ISO	PLAZA Integrative Orthology	beta-N-acetylglucosaminidase activity	Os03g0418000
GO:0008843	ISO	PLAZA Integrative Orthology	endochitinase activity	Os03g0418000

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005576	ISM	Gene Ontology	extracellular region
GO:0005773	IDA IEA	GOA Database	vacuole
GO:0005773	HDA	Gene Ontology	vacuole	3
GO:0000325	HDA	Gene Ontology	plant-type vacuole	4
GO:0099503	HDA	Gene Ontology	secretory vesicle	5
GO:0005622	IGI	Gene Ontology	intracellular anatomical structure	2
GO:0005774	IDA	GOA Database	vacuolar membrane
GO:0005829	IDA	GOA Database	cytosol

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001002	Chitin-binding, type 1
IPR000726	Glycoside hydrolase, family 19, catalytic
IPR036861	Endochitinase-like superfamily
IPR023346	Lysozyme-like domain superfamily
IPR016283	Glycoside hydrolase, family 19

Mapman id	Description
35.1	not assigned.annotated