Gene: COL.COLO4_20946

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_20946
  • Transcript Identifier COL.rna19703
  • Gene Type Coding gene
  • Location AWUE01017522.1 : 1514-5678 : negative

Gene Family Information

  • ID HOM05D000834
  • #Genes/#Species 714/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna19703
  • GenBank OMO86754.1
  • id gene20918
  • gene_name COLO4_20946
  • uniprot A0A1R3IW17

Descriptions

  • Description Pyridoxal phosphate-dependent decarboxylase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019752
IEA
GOA Databasecarboxylic acid metabolic process
GO:0019752
IEA
InterProcarboxylic acid metabolic process
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT4G28680
GO:0006587
ISO
PLAZA Integrative Orthologyserotonin biosynthetic process from tryptophan Os07g0437500
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT4G28680
GO:1901695
ISO
PLAZA Integrative Orthologytyramine biosynthetic process AT4G28680
GO:0006559
ISO
PLAZA Integrative OrthologyL-phenylalanine catabolic process AT2G20340
GO:0006520
IEA
GOA Databasecellular amino acid metabolic process
GO:0006520
IEA
InterProcellular amino acid metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990055
ISO
PLAZA Integrative Orthologyphenylacetaldehyde synthase activity AT2G20340
GO:0036469
ISO
PLAZA Integrative OrthologyL-tryptophan decarboxylase activity Os07g0437500
GO:0004058
ISO
PLAZA Integrative Orthologyaromatic-L-amino-acid decarboxylase activity AT4G28680
GO:0004837
ISO
PLAZA Integrative Orthologytyrosine decarboxylase activity AT4G28680
GO:0030170
IEA
GOA Databasepyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0016831
IEA
GOA Databasecarboxy-lyase activity
GO:0016831
IEA
InterProcarboxy-lyase activity
GO:0016830
IEA
GOA Databasecarbon-carbon lyase activity
GO:0016830
IEA
InterProcarbon-carbon lyase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016829
IEA
GOA Databaselyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G28680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015424 Pyridoxal phosphate-dependent transferase
IPR010977 Aromatic-L-amino-acid decarboxylase
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR002129 Pyridoxal phosphate-dependent decarboxylase
Mapman id Description
4.2.8.3 Amino acid metabolism.degradation.aromatic amino acid.aromatic amino acid decarboxylase