Gene: COL.COLO4_18958

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_18958
  • Transcript Identifier COL.rna17721
  • Gene Type Coding gene
  • Location AWUE01016532.1 : 25556-28396 : positive

Gene Family Information

  • ID HOM05D003327
  • #Genes/#Species 205/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna17721
  • GenBank OMO90686.1
  • id gene18930
  • gene_name COLO4_18958
  • uniprot A0A1R3J7E0

Descriptions

  • Description Ubiquitin
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR027108 Pre-mRNA-processing factor 6/Prp1/STA1
IPR029071 Ubiquitin-like domain superfamily
IPR045075 Pre-mRNA-splicing factor Syf1-like
IPR003107 HAT (Half-A-TPR) repeat
Mapman id Description
35.1 not assigned.annotated