Gene: COL.COLO4_18700
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_18700
- Transcript Identifier COL.rna17463
- Gene Type Coding gene
- Location AWUE01016489.1 : 7276-12414 : negative
Gene Family Information
- ID HOM05D001758
- #Genes/#Species 369/100
- Phylogenetic origin
- ID ORTHO05D005969
- #Genes/#Species 149/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna17463
- GenBank OMO91014.1
- id gene18672
- gene_name COLO4_18700
- uniprot A0A1R3J870
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0015031 | IEA | InterPro | protein transport | |
| GO:0006886 | IEA | GOA Database | intracellular protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030276 | IEA | GOA Database | clathrin binding | |
| GO:0030276 | IEA | InterPro | clathrin binding | |
| GO:0043424 | ISO | PLAZA Integrative Orthology | protein histidine kinase binding | AT5G11490 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0030131 | IEA | GOA Database | clathrin adaptor complex | |
| GO:0030131 | IEA | InterPro | clathrin adaptor complex | |
| GO:0030117 | IEA | GOA Database | membrane coat | |
| GO:0030117 | IEA | InterPro | membrane coat | |
| GO:0030124 | ISO | PLAZA Integrative Orthology | AP-4 adaptor complex | AT5G11490 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015151 | Beta-adaptin appendage, C-terminal subdomain |
| IPR016342 | AP-1/2/4 complex subunit beta |
| IPR012295 | TBP domain superfamily |
| IPR002553 | Clathrin/coatomer adaptor, adaptin-like, N-terminal |
| IPR016024 | Armadillo-type fold |
| IPR026739 | AP complex subunit beta |
| IPR011989 | Armadillo-like helical |
| Mapman id | Description |
|---|---|
| 22.3.1.5.2 | Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-4 vacuole cargo adaptor complex.large subunit beta (AP4B) |