Gene: AT5G11490

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G11490
  • Transcript Identifier AT5G11490.1
  • Gene Type Coding gene
  • Location Chr5 : 3671964-3676144 : positive

Gene Family Information

  • ID HOM05D001758
  • #Genes/#Species 369/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G11490.1
  • uniprot Q9LDK9

Descriptions

  • Description adaptin family protein
  • Computational description adaptin family protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0016192
IBA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
Gene Ontologyvesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
Gene Ontologyintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030276
IEA
Gene Ontologyclathrin binding
GO:0030276
IEA
InterProclathrin binding
GO:0043424
IPI
Gene Ontologyprotein histidine kinase binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0030117
IEA
GOA Databasemembrane coat
GO:0030117
IEA
InterPromembrane coat
GO:0030131
IEA
Gene Ontologyclathrin adaptor complex
GO:0030131
IEA
InterProclathrin adaptor complex
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0030665
IEA
GOA Databaseclathrin-coated vesicle membrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0030124
IPI
Gene OntologyAP-4 adaptor complex2
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015151 Beta-adaptin appendage, C-terminal subdomain
IPR011989 Armadillo-like helical
IPR016024 Armadillo-type fold
IPR016342 AP-1/2/4 complex subunit beta
IPR026739 AP complex subunit beta
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR012295 TBP domain superfamily
Mapman id Description
22.3.1.5.2 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-4 vacuole cargo adaptor complex.large subunit beta (AP4B)