Gene: COL.COLO4_17895

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_17895
  • Transcript Identifier COL.rna16659
  • Gene Type Coding gene
  • Location AWUE01016396.1 : 24073-26513 : positive

Gene Family Information

  • ID HOM05D004799
  • #Genes/#Species 154/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna16659
  • GenBank OMO92068.1
  • id gene17867
  • gene_name COLO4_17895
  • uniprot A0A1R3JB52

Descriptions

  • Description Exon junction complex, Pym
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1903259
IEA
GOA Databaseexon-exon junction complex disassembly
GO:1903259
IEA
InterProexon-exon junction complex disassembly
GO:0010628
ISO
PLAZA Integrative Orthologypositive regulation of gene expression AT1G11400

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G11400

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G11400
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT1G11400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039333 Partner of Y14 and mago
IPR036348 WIBG, N-terminal domain superfamily
IPR015362 WIBG, Mago-binding
Mapman id Description
17.3.1.2.3 Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).peripheral components.component PYM