Gene: COL.COLO4_17713
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_17713
- Transcript Identifier COL.rna16477
- Gene Type Coding gene
- Location AWUE01016378.1 : 114710-117241 : positive
Gene Family Information
- ID HOM05D000974
- #Genes/#Species 616/99
- Phylogenetic origin
- ID ORTHO05D006000
- #Genes/#Species 149/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna16477
- GenBank OMO92299.1
- id gene17685
- gene_name COLO4_17713
- uniprot A0A1R3JBW9
Descriptions
- Description Phosphoribosylglycinamide synthetase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006189 | IEA | GOA Database | 'de novo' IMP biosynthetic process | |
| GO:0006164 | IEA | GOA Database | purine nucleotide biosynthetic process | |
| GO:0009113 | IEA | GOA Database | purine nucleobase biosynthetic process | |
| GO:0009113 | IEA | InterPro | purine nucleobase biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004637 | IEA | GOA Database | phosphoribosylamine-glycine ligase activity | |
| GO:0004637 | IEA | InterPro | phosphoribosylamine-glycine ligase activity | |
| GO:0016874 | IEA | GOA Database | ligase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G09830 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G09830 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011054 | Rudiment single hybrid motif |
| IPR020560 | Phosphoribosylglycinamide synthetase, C-domain |
| IPR020561 | Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain |
| IPR000115 | Phosphoribosylglycinamide synthetase |
| IPR016185 | Pre-ATP-grasp domain superfamily |
| IPR037123 | Phosphoribosylglycinamide synthetase, C-domain superfamily |
| IPR013815 | ATP-grasp fold, subdomain 1 |
| IPR020562 | Phosphoribosylglycinamide synthetase, N-terminal |
| Mapman id | Description |
|---|---|
| 6.1.1.2 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.glycinamide RN synthetase (GARS) |