Gene: COL.COLO4_17696

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_17696
  • Transcript Identifier COL.rna16460
  • Gene Type Coding gene
  • Location AWUE01016378.1 : 31632-36544 : positive

Gene Family Information

  • ID HOM05D000509
  • #Genes/#Species 1053/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna16460
  • GenBank OMO92282.1
  • id gene17668
  • gene_name COLO4_17696
  • uniprot A0A1R3JBT2

Descriptions

  • Description Small GTPase superfamily
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045492
IEA
GOA Databasexylan biosynthetic process
GO:0045492
IEA
InterProxylan biosynthetic process
GO:0045491
ISO
PLAZA Integrative Orthologyxylan metabolic process AT1G09610

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0030775
ISO
PLAZA Integrative Orthologyglucuronoxylan 4-O-methyltransferase activity AT1G09610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G09610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001806 Small GTPase
IPR021148 Polysaccharide biosynthesis domain
IPR006514 IRX15/IRX15L/IGXM
IPR005225 Small GTP-binding protein domain
Mapman id Description
21.2.2.2.3 Cell wall organisation.hemicellulose.xylan.modification and degradation.glucuronoxylan 4-O-methyltransferase
22.3.4.1.4 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.D-class RAB GTPase